MetaCyc Pathway: purine nucleotides degradation I (plants) in Burkholderia phytofirmans PsJN

Add experiment(s):


Adenosine-phosphate deaminase:
AMP + H+ + H2O→IMP + ammonium
(EC 3.5.4.17; 3.5.4.6)
No genes
5'-nucleotidase:
GMP + H2O→guanosine + phosphate
(EC 3.1.3.5)
BPHYT_RS01605
BPHYT_RS03140
BPHYT_RS09100
BPHYT_RS26570
Guanosine deaminase:
guanosine + H+ + H2O→xanthosine + ammonium
(EC 3.5.4.15)
No genes
IMP dehydrogenase:
IMP + NAD+ + H2O→XMP + NADH + H+
(EC 1.1.1.205)
BPHYT_RS10250
BPHYT_RS12020
BPHYT_RS13715
BPHYT_RS24710
BPHYT_RS27545
BPHYT_RS31260
5'-nucleotidase:
IMP + H2O→inosine + phosphate
(EC 3.1.3.5; 3.1.3.99)
BPHYT_RS01605
BPHYT_RS03140
BPHYT_RS09100
BPHYT_RS26570
Purine nucleosidase:
guanosine + H2O→guanine + D-ribofuranose
(EC 3.2.2.1)
BPHYT_RS20700
BPHYT_RS21970
BPHYT_RS24460
Guanine deaminase:
guanine + H+ + H2O→xanthine + ammonium
(EC 3.5.4.3)
BPHYT_RS11520
BPHYT_RS15100
Inosine nucleosidase:
inosine + H2O→hypoxanthine + D-ribofuranose
(EC 3.2.2.2)
BPHYT_RS20700
BPHYT_RS21970
BPHYT_RS24460
5'-nucleotidase:
XMP + H2O→xanthosine + phosphate
(EC 3.1.3.5)
BPHYT_RS01605
BPHYT_RS03140
BPHYT_RS09100
BPHYT_RS26570
Xanthine dehydrogenase:
hypoxanthine + NAD+ + H2O→xanthine + NADH + H+
(EC 1.17.1.4)
BPHYT_RS03865
BPHYT_RS03870
BPHYT_RS10825
BPHYT_RS15080
BPHYT_RS15085
BPHYT_RS20910
BPHYT_RS20915
BPHYT_RS24595
BPHYT_RS29710
BPHYT_RS29715
Purine nucleosidase:
xanthosine + H2O→xanthine + D-ribofuranose
(EC 3.2.2.1)
BPHYT_RS20700
BPHYT_RS21970
BPHYT_RS24460
Xanthine dehydrogenase:
xanthine + NAD+ + H2O→urate + NADH + H+
(EC 1.17.1.4)
BPHYT_RS03865
BPHYT_RS03870
BPHYT_RS10825
BPHYT_RS15080
BPHYT_RS15085
BPHYT_RS20910
BPHYT_RS20915
BPHYT_RS24595
BPHYT_RS29710
BPHYT_RS29715

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information