MetaCyc Pathway: fatty acid salvage in Shewanella sp. ANA-3

Add experiment(s):


Butyrate--CoA ligase:
decanoate + ATP + coenzyme A→decanoyl-CoA + AMP + diphosphate (EC 6.2.1.2; 6.2.1.3)
Shewana3_0080
Shewana3_2386
Shewana3_2475
Shewana3_3231
decanoyl-CoA + an oxidized electron-transfer flavoprotein + H+→(2E)-dec-2-enoyl-CoA + a reduced electron-transfer flavoprotein (EC 1.3.8.7)
Shewana3_1984
Shewana3_2323 (fadE)
Shewana3_2552
Long-chain-enoyl-CoA hydratase (in reverse):
(2E)-dec-2-enoyl-CoA + H2O→(S)-3-hydroxydecanoyl-CoA (EC 4.2.1.74)
Shewana3_0024 (fadB)
Shewana3_0572
Shewana3_0721
Shewana3_1461 (fadJ)
3-hydroxyacyl-CoA dehydrogenase:
(S)-3-hydroxydecanoyl-CoA + NAD+→3-oxodecanoyl-CoA + NADH + H+ (EC 1.1.1.35)
Shewana3_0024 (fadB)
Shewana3_1461 (fadJ)
Shewana3_2768
Acetyl-CoA C-acyltransferase (in reverse):
3-oxodecanoyl-CoA + coenzyme A→octanoyl-CoA + acetyl-CoA (EC 2.3.1.16)
Shewana3_0023 (fadA)
Shewana3_1460 (fadI)
Shewana3_2771
octanoyl-CoA + a malonyl-[acp] + H+→a 3-oxodecanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.207)
Shewana3_1563

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information