MetaCyc Pathway: 4-deoxy-L-threo-hex-4-enopyranuronate degradation in Enterobacter sp. TBS_079

Add experiment(s):


Reactions and Genes D-Galacturonic Acid (C)
remove
4-deoxy-L-threo-hex-4-enopyranuronate→5-dehydro-4-deoxy-D-glucuronate (EC 4.2.99.25)
MPMX20_03708 +0.1
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase:
5-dehydro-4-deoxy-D-glucuronate→3-deoxy-D-glycero-2,5-hexodiulosonate (EC 5.3.1.17)
MPMX20_02813 +0.2
MPMX20_03716 +0.1
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (in reverse):
3-deoxy-D-glycero-2,5-hexodiulosonate + NADH + H+→2-dehydro-3-deoxy-D-gluconate + NAD+ (EC 1.1.1.127)
MPMX20_01886 +0.4
MPMX20_03715 -0.0
2-dehydro-3-deoxy-D-gluconate + ATP→2-dehydro-3-deoxy-D-gluconate 6-phosphate + ADP + H+ (EC 2.7.1.178; 2.7.1.45)
MPMX20_00179 +0.4
MPMX20_04411 -1.1
2-dehydro-3-deoxy-phosphogluconate aldolase:
2-dehydro-3-deoxy-D-gluconate 6-phosphate→D-glyceraldehyde 3-phosphate + pyruvate (EC 4.1.2.14; 4.1.2.55)
MPMX20_00526 +0.3
MPMX20_02755 -5.3

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information