MetaCyc Pathway: mixed acid fermentation in Enterobacter sp. TBS_079

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Reactions and Genes D-Raffinose (C)
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Phosphoenolpyruvate carboxylase (in reverse):
phosphoenolpyruvate + hydrogen carbonate→oxaloacetate + phosphate (EC 4.1.1.31)
MPMX20_04524 -3.1
Pyruvate kinase (in reverse):
phosphoenolpyruvate + ADP + H+→pyruvate + ATP (EC 2.7.1.40)
MPMX20_01951 -0.5
MPMX20_02759 -0.7
D-lactate dehydrogenase (in reverse):
pyruvate + NADH + H+→(R)-lactate + NAD+ (EC 1.1.1.28)
MPMX20_02132 +0.4
MPMX20_03101 -0.1
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38)
MPMX20_02369 +0.1
MPMX20_04140 -1.9
Formate C-acetyltransferase (in reverse):
pyruvate + coenzyme A→acetyl-CoA + formate (EC 2.3.1.54)
MPMX20_01463 +0.0
MPMX20_01464 +0.1
MPMX20_01561 -1.2
MPMX20_01562 -1.3
MPMX20_03448 +0.3
MPMX20_04018 -0.1
Acetaldehyde dehydrogenase (acetylating) (in reverse):
acetyl-CoA + NADH + H+→acetaldehyde + coenzyme A + NAD+ (EC 1.2.1.10)
MPMX20_02589 -1.1
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+ (EC 2.3.3.1; 2.3.3.16; 2.3.3.3)
MPMX20_01349 -5.0
formate + H+→CO2 + H2
MPMX20_01937 -0.0
MPMX20_03607 +0.2
MPMX20_03608 +0.3
MPMX20_03609 +0.5
Fumarate hydratase:
(S)-malate→fumarate + H2O (EC 4.2.1.2)
MPMX20_01958 +0.2
MPMX20_02021 -0.3
MPMX20_02022 +0.1
MPMX20_02966 -0.1
Phosphate acetyltransferase:
acetyl-CoA + phosphate→acetyl phosphate + coenzyme A (EC 2.3.1.8)
MPMX20_03227 -1.9
Acetate kinase (in reverse):
acetyl phosphate + ADP→acetate + ATP (EC 2.7.2.1; 2.7.2.15)
MPMX20_02754 -0.3
MPMX20_03226 -2.2
MPMX20_04019 +0.0
Aconitate hydratase:
citrate→cis-aconitate + H2O (EC 4.2.1.3)
MPMX20_00812 -2.8
MPMX20_02499 -0.1
Alcohol dehydrogenase (in reverse):
acetaldehyde + NADH + H+→ethanol + NAD+ (EC 1.1.1.1)
MPMX20_00006 +0.1
MPMX20_02209 +0.1
MPMX20_02371 -0.4
MPMX20_02515 +0.5
MPMX20_02589 -1.1
MPMX20_04122 +0.1
MPMX20_04159 +0.0
Succinate dehydrogenase (ubiquinone):
fumarate[in] + a menaquinol→succinate[in] + a menaquinone (EC 1.3.5.1)
MPMX20_00434 -0.1
MPMX20_00435 -0.2
MPMX20_00436 +0.0
MPMX20_00437 -0.1
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate (EC 4.2.1.3)
MPMX20_00812 -2.8
MPMX20_02499 -0.1
Isocitrate dehydrogenase (NADP(+)):
D-threo-isocitrate + NADP+→CO2 + 2-oxoglutarate + NADPH (EC 1.1.1.42)
MPMX20_01820 N.D.

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information