MetaCyc Pathway: (1,4)-β-D-xylan degradation in Phocaeicola vulgatus CL09T03C04

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Reactions and Genes (+)-Arabinogalactan; autoclaved 5 mg/ml (C)
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Endo-1,4-beta-xylanase:
a (1→4)-β-D-xylan + n H2O→n a (1->4)-β-D-xylan oligosaccharide (EC 3.2.1.8; 3.2.1.M32; 3.2.1.M34; 3.2.1.M35)
No genes
Xylan 1,4-beta-xylosidase:
a (1->4)-β-D-xylan oligosaccharide + n H2O→n β-D-xylopyranose (EC 3.2.1.37)
HMPREF1058_RS08110 +0.0
HMPREF1058_RS08415 -0.1
HMPREF1058_RS08425 +0.2
HMPREF1058_RS10540 -1.6
HMPREF1058_RS10560 -0.3
HMPREF1058_RS14450 +0.2

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information