MetaCyc Pathway: glyoxylate cycle in Ralstonia sp. UNC404CL21Col

Add experiment(s):


Reactions and Genes Lauric (C)
remove
Aconitate hydratase:
citrate→cis-aconitate + H2O
(EC 4.2.1.3)
ABZR87_RS14605 +0.2
ABZR87_RS16735 -1.7
ABZR87_RS20490 -0.8
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate
(EC 4.2.1.3)
ABZR87_RS14605 +0.2
ABZR87_RS16735 -1.7
ABZR87_RS20490 -0.8
Isocitrate lyase:
D-threo-isocitrate→glyoxylate + succinate
(EC 4.1.3.1)
ABZR87_RS08330 -1.3
ABZR87_RS11590 -0.2
Malate synthase:
glyoxylate + acetyl-CoA + H2O→(S)-malate + coenzyme A + H+
(EC 2.3.3.9)
ABZR87_RS11625 -6.4
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+
(EC 1.1.1.37; 1.1.1.38)
ABZR87_RS14580 N.D.
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+
(EC 2.3.3.1; 2.3.3.16; 2.3.3.3)
ABZR87_RS04350 -0.2
ABZR87_RS14545 N.D.
ABZR87_RS17920 +0.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information