MetaCyc Pathway: pentose phosphate pathway (non-oxidative branch) II in Sinorhizobium meliloti 1021

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Reactions and Genes L-Lysine (C)
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Ribose-5-phosphate isomerase (in reverse):
D-ribulose 5-phosphate→D-ribose 5-phosphate (EC 5.3.1.6)
SM_b20371 +0.1
SMc00152 N.D.
SMc01613 -0.4
Ribulose-phosphate 3-epimerase:
D-ribulose 5-phosphate→D-xylulose 5-phosphate (EC 5.1.3.1)
SM_b20195 +0.0
SMc00511 -0.3
Transketolase (in reverse):
D-ribose 5-phosphate + D-xylulose 5-phosphate→D-sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate (EC 2.2.1.1)
SM_b20200 -1.0
SMc00269 -0.0
SMc00270 +0.1
SMc02342 -0.2
SMc03978 -2.0
Diphosphate--fructose-6-phosphate 1-phosphotransferase:
D-sedoheptulose 7-phosphate + diphosphate→D-sedoheptulose 1,7-bisphosphate + H+ + phosphate (EC 2.7.1.90)
No genes
Fructose-bisphosphate aldolase:
D-sedoheptulose 1,7-bisphosphate→D-erythrose 4-phosphate + glycerone phosphate (EC 4.1.2.13)
SM_b20199 -0.4
SM_b20498 +0.1
SM_b21192 +0.4
SMc03983 -0.3
Transketolase:
D-erythrose 4-phosphate + D-xylulose 5-phosphate→D-glyceraldehyde 3-phosphate + β-D-fructofuranose 6-phosphate (EC 2.2.1.1)
SM_b20200 -1.0
SMc00269 -0.0
SMc00270 +0.1
SMc02342 -0.2
SMc03978 -2.0

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information