MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Sinorhizobium meliloti 1021

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Reactions and Genes L-Lysine (C)
remove
geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)
No genes
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
SM_b20039 -0.1
SMa0387 -0.0
SMc00294 -2.7
SMc00387 -0.1
SMc00490 +0.2
SMc00710 -0.5
SMc01406 -0.1
SMc01578 -0.4
SMc01969 -0.3
SMc02251 -0.0
SMc02262 -0.0
SMc02393 +0.1
SMc03885 +0.1
SMc04323 -0.0
SMc04326 -0.1
SMc04386 -3.0
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
SM_b20581 -0.1
SMc03211 +0.1
all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)
No genes
2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information