| Reactions and Genes | RCH2_defined_Glucose_noNitrogen in Eppendorf tube with sand |
|---|
| remove |
3-phenylpropanoate dioxygenase:
3-phenylpropanoate + NADH + dioxygen + H+→3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate + NAD+ (EC 1.14.12.19) |
| No genes |
| 3-(3-hydroxyphenyl)propanoate + NADH + dioxygen + H+→3-(2,3-dihydroxyphenyl)propanoate + NAD+ + H2O (EC 1.14.13.127) |
| BWI76_RS16925 | +0.1 |
| 3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate + NAD+→3-(2,3-dihydroxyphenyl)propanoate + NADH + H+ (EC 1.3.1.87) |
| No genes |
3-carboxyethylcatechol 2,3-dioxygenase:
3-(2,3-dihydroxyphenyl)propanoate + dioxygen→(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate + H+ (EC 1.13.11.16) |
| BWI76_RS16920 | +0.2 |
| (2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate + H2O→(2Z)-2-hydroxypenta-2,4-dienoate + H+ + succinate (EC 3.7.1.14) |
| BWI76_RS16915 | -0.6 |
2-oxopent-4-enoate hydratase (in reverse):
(2Z)-2-hydroxypenta-2,4-dienoate + H2O→(S)-4-hydroxy-2-oxopentanoate (EC 4.2.1.80) |
| BWI76_RS16910 | +0.0 |
4-hydroxy-2-oxovalerate aldolase:
(S)-4-hydroxy-2-oxopentanoate→acetaldehyde + pyruvate (EC 4.1.3.39) |
| BWI76_RS16900 | -0.3 |
Acetaldehyde dehydrogenase (acetylating):
acetaldehyde + coenzyme A + NAD+→acetyl-CoA + NADH + H+ (EC 1.2.1.10) |
| BWI76_RS02835 | +0.1 |
| BWI76_RS03590 | +0.1 |
| BWI76_RS16905 | +0.0 |
| BWI76_RS17250 | -2.3 |
| BWI76_RS20790 | -0.1 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information