MetaCyc Pathway: aerobic respiration I (cytochrome c) in Bacteroides thetaiotaomicron VPI-5482

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Reactions and Genes BHIS with Trimethoprim 0.00625 mM
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NADH[in] + 5 H+[in] + a ubiquinone→a ubiquinol + NAD+[in] + 4 H+[out] (EC 7.1.1.2)
BT1537 -0.5
BT2434 -0.6
BT4058 +0.1
BT4059 +0.0
BT4060 +0.2
BT4061 +0.2
BT4062 +0.7
BT4063 -0.9
BT4064 +1.7
BT4065 +0.4
BT4066 +0.2
BT4067 -0.3
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
BT3054 N.D.
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information