MetaCyc Pathway: ppGpp metabolism in Enterobacter sp. TBS_079

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Reactions and Genes 0.1X LB plate, Mixed culture; Pseudomonas lini TBS_028 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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Nucleoside-diphosphate kinase:
GDP + ATP→GTP + ADP (EC 2.7.4.6)
MPMX20_01076 N.D.
MPMX20_03396 -1.1
GTP diphosphokinase:
GTP + ATP→pppGpp + AMP + H+ (EC 2.7.6.5)
MPMX20_00086 +1.5
MPMX20_03653 -0.6
Guanosine-5'-triphosphate,3'-diphosphate diphosphatase:
pppGpp + H2O→ppGpp + H+ + phosphate (EC 3.6.1.40)
MPMX20_00745 -2.0
MPMX20_03357 +0.3
MPMX20_04493 +1.6
Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase:
pppGpp + H2O→GTP + diphosphate (EC 3.1.7.2)
MPMX20_00086 +1.5
Guanosine-3',5'-bis(diphosphate) 3'-diphosphatase:
ppGpp + H2O→GDP + diphosphate (EC 3.1.7.2)
MPMX20_00086 +1.5
GTP diphosphokinase:
GDP + ATP→ppGpp + AMP + H+ (EC 2.7.6.5)
MPMX20_00086 +1.5
MPMX20_03653 -0.6

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information