MetaCyc Pathway: ammonia assimilation cycle III in Pseudomonas syringae pv. syringae B728a

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Reactions and Genes Citric Acid (C)
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Glutamate synthase (NADPH):
L-glutamine + H2O→ammonia + L-glutamate + H+ (EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)
Psyr_0262 -0.1
Psyr_0411 -3.6
Psyr_0412 -3.6
Psyr_0418 +0.1
Psyr_0616 -0.0
Psyr_1014 +0.1
Psyr_1262 N.D.
Psyr_1280 -1.1
Psyr_1361 N.D.
Psyr_2035 +0.1
Psyr_2058 N.D.
Psyr_2072 +1.2
Psyr_2080 -0.5
Psyr_2145 N.D.
Psyr_2275 +0.3
Psyr_2276 -0.3
Psyr_2292 +0.4
Psyr_2426 N.D.
Psyr_2765 -0.7
Psyr_2911 +0.2
Psyr_3058 +0.3
Psyr_3240 -0.2
Psyr_3260 +0.2
Psyr_3668 N.D.
Psyr_3747 +0.0
Psyr_3938 +0.3
Psyr_4015 -1.3
Psyr_4055 -0.0
Psyr_4164 N.D.
Psyr_4165 N.D.
Psyr_4166 N.D.
Psyr_4191 N.D.
Psyr_4192 N.D.
Psyr_4315 +0.1
Psyr_4375 -0.1
Psyr_4465 -0.4
Psyr_4581 -1.6
Psyr_4609 -4.0
Glutamate synthase (NADPH) (in reverse):
ammonia + 2-oxoglutarate + NADPH + 2 H+→L-glutamate + NADP+ + H2O (EC 1.4.1.13; 1.4.1.14)
Psyr_0262 -0.1
Psyr_0411 -3.6
Psyr_0412 -3.6
Psyr_0418 +0.1
Psyr_0616 -0.0
Psyr_1014 +0.1
Psyr_1280 -1.1
Psyr_2035 +0.1
Psyr_2058 N.D.
Psyr_2072 +1.2
Psyr_2145 N.D.
Psyr_2275 +0.3
Psyr_2276 -0.3
Psyr_2426 N.D.
Psyr_2765 -0.7
Psyr_2911 +0.2
Psyr_3260 +0.2
Psyr_3668 N.D.
Psyr_4015 -1.3
Psyr_4055 -0.0
Psyr_4375 -0.1
Psyr_4465 -0.4
Glutamate--ammonia ligase:
L-glutamate + ammonium + ATP→L-glutamine + ADP + H+ + phosphate (EC 6.3.1.2)
Psyr_2273 -0.7
Psyr_3492 +0.0
Psyr_4817 N.D.
Psyr_4867 -0.8
Psyr_4868 -0.4

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information