| Reactions and Genes | 7H9 with nitrite 1.5 mM; pH 5.5 |
|---|
| remove |
3-beta-hydroxy-Delta(5)-steroid dehydrogenase:
cholesterol + NAD+→cholest-5-en-3-one + NADH + H+ (EC 1.1.1.145) |
| Rv1106c | +0.1 |
Steroid Delta-isomerase:
cholest-5-en-3-one→cholest-4-en-3-one (EC 5.3.3.1) |
| Rv0760c | +0.3 |
| Rv1106c | +0.1 |
| cholest-4-en-3-one + dioxygen + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→(25S)-26-hydroxycholest-4-en-3-one + 2 an oxidized ferredoxin [iron-sulfur] cluster + H2O (EC 1.14.15.29) |
| No genes |
| cholest-4-en-3-one + dioxygen + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→(25R)-26-hydroxycholest-4-en-3-one + 2 an oxidized ferredoxin [iron-sulfur] cluster + H2O (EC 1.14.15.28) |
| No genes |
| (25S)-26-hydroxycholest-4-en-3-one + dioxygen + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→(25S)-26-oxocholest-4-en-3-one + 2 an oxidized ferredoxin [iron-sulfur] cluster + 2 H2O (EC 1.14.15.29) |
| No genes |
| (25R)-26-hydroxycholest-4-en-3-one + dioxygen + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→(25R)-26-oxocholest-4-en-3-one + 2 an oxidized ferredoxin [iron-sulfur] cluster + 2 H2O (EC 1.14.15.28) |
| No genes |
| (25S)-26-oxocholest-4-en-3-one + dioxygen + H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→(25S)-3-oxocholest-4-en-26-oate + 2 an oxidized ferredoxin [iron-sulfur] cluster + H2O (EC 1.14.15.29) |
| No genes |
| (25R)-26-oxocholest-4-en-3-one + dioxygen + H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→(25R)-3-oxocholest-4-en-26-oate + 2 an oxidized ferredoxin [iron-sulfur] cluster + H2O (EC 1.14.15.28) |
| No genes |
| (25S)-3-oxocholest-4-en-26-oate + ATP + coenzyme A→(25S)-3-oxocholest-4-en-26-oyl-CoA + AMP + diphosphate (EC 6.2.1.42) |
| Rv3515c | +0.0 |
| (25R)-3-oxocholest-4-en-26-oate + ATP + coenzyme A→(25R)-3-oxocholest-4-en-26-oyl-CoA + AMP + diphosphate (EC 6.2.1.42) |
| Rv3515c | +0.0 |
Alpha-methylacyl-CoA racemase (in reverse):
(25R)-3-oxocholest-4-en-26-oyl-CoA→(25S)-3-oxocholest-4-en-26-oyl-CoA (EC 5.1.99.4) |
| Rv0855 | +0.0 |
| Rv1143 | -0.3 |
| (25S)-3-oxocholest-4-en-26-oyl-CoA + an oxidized electron carrier→3-oxocholest-4,24-dien-26-oyl-CoA + a reduced two electron carrier |
| Rv3504 | -0.0 |
| Rv3505 | -0.2 |
| 3-oxocholest-4,24-dien-26-oyl-CoA + H2O→24-hydroxy-3-oxocholest-4-en-26-oyl-CoA |
| Rv3516 | +0.0 |
3-hydroxyacyl-CoA dehydrogenase:
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA + NAD+→3,24-dioxocholest-4-en-26-oyl-CoA + NADH + H+ (EC 1.1.1.35) |
| Rv0468 | -0.4 |
| Rv0860 | N.D. |
| Rv1144 | +0.2 |
Propanoyl-CoA C-acyltransferase (in reverse):
3,24-dioxocholest-4-en-26-oyl-CoA + coenzyme A→3-oxochol-4-en-24-oyl-CoA + propanoyl-CoA (EC 2.3.1.176) |
| Rv3546 | -0.4 |
| 3-oxochol-4-en-24-oyl-CoA + an oxidized electron carrier→3-oxochol-4,22-dien-24-oyl-CoA + a reduced two electron carrier |
| Rv3573c | +0.2 |
| 3-oxochol-4,22-dien-24-oyl-CoA + H2O→22-hydroxy-3-oxochol-4-en-24-oyl-CoA |
| No genes |
| 22-hydroxy-3-oxochol-4-en-24-oyl-CoA + NAD+→3,22-dioxochol-4-en-24-oyl-CoA + NADH + H+ |
| No genes |
Acetyl-CoA C-acyltransferase (in reverse):
3,22-dioxochol-4-en-24-oyl-CoA + coenzyme A→acetyl-CoA + 3-oxo-23,24-bisnorchol-4-en-22-oyl-CoA (EC 2.3.1.16) |
| Rv0243 | +0.1 |
| Rv0859 | N.D. |
| Rv0914c | +0.4 |
| Rv1074c | -1.2 |
| Rv1135A | N.D. |
| Rv1323 | -0.7 |
| Rv2790c | +0.1 |
| Rv3523 | +0.1 |
| Rv3546 | -0.4 |
| Rv3556c | +0.5 |
| 3-oxo-23,24-bisnorchol-4-en-22-oyl-CoA + an oxidized electron carrier→3-oxo-23,24-bisnorchol-4,17(20)-dien-22-oyl-CoA + a reduced two electron carrier |
| Rv3543c | +0.5 |
| Rv3544c | -0.3 |
| 3-oxo-23,24-bisnorchol-4,17(20)-dien-22-oyl-CoA + H2O→17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA |
| Rv3541c | N.D. |
| Rv3542c | +0.1 |
| 17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA→propanoyl-CoA + androstenedione |
| Rv3540c | +0.2 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information