MetaCyc Pathway: aerobic respiration II (cytochrome c) (yeast) in Pseudomonas fluorescens FW300-N2E3

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Reactions and Genes 4C survival; 192 hrs
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NADH[in] + H+[in] + a ubiquinone→a ubiquinol + NAD+[in] (EC 1.6.5.9)
AO353_14255 +0.2
AO353_23580 +0.1
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
AO353_01845 N.D.
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
AO353_00585 -1.4
AO353_00590 -0.7
AO353_00595 N.D.
AO353_00600 -1.1
AO353_00605 -0.7
AO353_00610 -0.2
AO353_00615 N.D.
AO353_00620 +0.3
AO353_10830 -0.0
AO353_10835 -0.2
AO353_10845 +0.1
AO353_17485 +0.1
AO353_17490 -0.1
AO353_17495 +0.0
AO353_17500 +0.0
AO353_22860 -1.0

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information