MetaCyc Pathway: pyrimidine deoxyribonucleosides degradation in Klebsiella michiganensis M5al

Add experiment(s):


Reactions and Genes Cytidine (N)
remove
Cytidine deaminase:
2'-deoxycytidine + H+ + H2O→2'-deoxyuridine + ammonium (EC 3.5.4.5)
BWI76_RS19610 -3.4
Pyrimidine-nucleoside phosphorylase:
thymidine + phosphate→2-deoxy-α-D-ribose 1-phosphate + thymine (EC 2.4.2.2; 2.4.2.4)
BWI76_RS04135 +0.4
BWI76_RS06200 +0.1
Pyrimidine-nucleoside phosphorylase:
2'-deoxyuridine + phosphate→2-deoxy-α-D-ribose 1-phosphate + uracil (EC 2.4.2.2; 2.4.2.3)
BWI76_RS01010 -0.1
BWI76_RS01295 +0.5
BWI76_RS04135 +0.4
BWI76_RS04145 +0.1
BWI76_RS11440 +0.5

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information