MetaCyc Pathway: D-arabinose degradation II in Burkholderia phytofirmans PsJN

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Reactions and Genes 2-Deoxy-D-Ribose (C)
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Arabinose isomerase:
D-arabinopyranose→D-ribulose (EC 5.3.1.3)
No genes
L-fuculokinase:
D-ribulose + ATP→D-ribulose 1-phosphate + ADP + H+ (EC 2.7.1.51)
No genes
L-fuculose-phosphate aldolase:
D-ribulose 1-phosphate→glycerone phosphate + glycolaldehyde (EC 4.1.2.17)
No genes
Glycolaldehyde dehydrogenase:
glycolaldehyde + NAD+ + H2O→glycolate + NADH + 2 H+ (EC 1.2.1.21)
BPHYT_RS00395 -0.3
BPHYT_RS05370 -0.4
BPHYT_RS07490 +0.4
BPHYT_RS09875 +0.0
BPHYT_RS09900 -0.1
BPHYT_RS20795 -0.5
BPHYT_RS25705 -0.0
BPHYT_RS25810 -6.1
BPHYT_RS27405 -0.7
BPHYT_RS29875 -0.2
BPHYT_RS30510 +0.1
BPHYT_RS34980 +0.0
BPHYT_RS35600 +0.3

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information