MetaCyc Pathway: Entner-Doudoroff pathway II (non-phosphorylative) in Burkholderia phytofirmans PsJN

Reactions and Genes	2-Deoxy-D-Ribose (C)
Glucose 1-dehydrogenase (NADP(+)): D-glucopyranose + NADP+→D-glucono-1,5-lactone + NADPH + H+ (EC 1.1.1.119; 1.1.1.360)
BPHYT_RS35785	-0.7
Gluconolactonase: D-glucono-1,5-lactone + H2O→D-gluconate + H+ (spontaneous) (EC 3.1.1.17)
BPHYT_RS21245	-0.0
BPHYT_RS24170	+0.2
D-gluconate→2-dehydro-3-deoxy-D-gluconate + H2O (EC 4.2.1.140; 4.2.1.39)
BPHYT_RS09885	+0.1
BPHYT_RS16405	+0.1
2-dehydro-3-deoxy-D-gluconate→D-glyceraldehyde + pyruvate (EC 4.1.2.51)
No genes
D-glyceraldehyde + an oxidized electron carrier + H2O→D-glycerate + a reduced two electron carrier + H+ (EC 1.2.99.8)
BPHYT_RS00395	-0.2
BPHYT_RS05370	+0.1
BPHYT_RS07490	+0.1
BPHYT_RS09900	-0.2
BPHYT_RS20795	-0.1
BPHYT_RS25705	-0.1
BPHYT_RS25810	-3.3
BPHYT_RS27405	-0.5
BPHYT_RS29875	+0.2
BPHYT_RS30510	+0.6
BPHYT_RS34980	+0.1
BPHYT_RS35600	+0.2
D-glycerate + ATP→2-phospho-D-glycerate + ADP + H+ (EC 2.7.1.165)
No genes
Phosphopyruvate hydratase: 2-phospho-D-glycerate→phosphoenolpyruvate + H2O (EC 4.2.1.11)
BPHYT_RS12675	N.D.
Pyruvate kinase (in reverse): phosphoenolpyruvate + ADP + H+→pyruvate + ATP (EC 2.7.1.40)
BPHYT_RS16265	-0.5
Pyruvate synthase: pyruvate + coenzyme A + 2 an oxidized ferredoxin [iron-sulfur] cluster→acetyl-CoA + CO2 + H+ + 2 a reduced ferredoxin [iron-sulfur] cluster (EC 1.2.7.1)
No genes

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information