MetaCyc Pathway: fatty acid salvage in Pseudomonas fluorescens FW300-N2C3

Add experiment(s):


Reactions and Genes Carnitine Hydrochloride (N)
remove
Butyrate--CoA ligase:
decanoate + ATP + coenzyme A→decanoyl-CoA + AMP + diphosphate (EC 6.2.1.2; 6.2.1.3)
AO356_01575 -0.1
AO356_05100 +0.2
AO356_05105 -0.2
AO356_19560 -0.0
decanoyl-CoA + an oxidized electron-transfer flavoprotein + H+→(2E)-dec-2-enoyl-CoA + a reduced electron-transfer flavoprotein (EC 1.3.8.7)
AO356_09020 +0.1
AO356_14165 -0.5
AO356_14185 +0.0
AO356_14190 -0.1
AO356_15445 +0.1
AO356_20030 +0.1
Long-chain-enoyl-CoA hydratase (in reverse):
(2E)-dec-2-enoyl-CoA + H2O→(S)-3-hydroxydecanoyl-CoA (EC 4.2.1.74)
AO356_02330 N.D.
AO356_04640 -0.2
AO356_10120 +0.0
AO356_12440 -0.1
AO356_17825 -0.3
AO356_26645 -0.1
AO356_30295 +0.0
AO356_30355 -0.3
AO356_30360 -0.2
3-hydroxyacyl-CoA dehydrogenase:
(S)-3-hydroxydecanoyl-CoA + NAD+→3-oxodecanoyl-CoA + NADH + H+ (EC 1.1.1.35)
AO356_02330 N.D.
AO356_10120 +0.0
AO356_13845 -3.3
AO356_20400 -0.1
AO356_30295 +0.0
Acetyl-CoA C-acyltransferase (in reverse):
3-oxodecanoyl-CoA + coenzyme A→octanoyl-CoA + acetyl-CoA (EC 2.3.1.16)
AO356_02325 -1.5
AO356_03560 -0.1
AO356_04930 -0.4
AO356_08090 +0.1
AO356_20395 -0.0
AO356_21640 -1.7
AO356_26350 +0.4
octanoyl-CoA + a malonyl-[acp] + H+→a 3-oxodecanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.207)
AO356_04275 +0.3

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information