MetaCyc Pathway: L-tyrosine biosynthesis I in Paraburkholderia graminis OAS925

Add experiment(s):


Reactions and Genes Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
remove
Chorismate mutase:
chorismate→prephenate (EC 5.4.99.5)
ABIE53_003157 -4.4
ABIE53_003222 +0.3
Prephenate dehydrogenase:
prephenate + NAD+→3-(4-hydroxyphenyl)pyruvate + CO2 + NADH (EC 1.3.1.12)
ABIE53_003155 N.D.
Aspartate transaminase (in reverse):
3-(4-hydroxyphenyl)pyruvate + L-glutamate→L-tyrosine + 2-oxoglutarate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
ABIE53_000369 -0.7
ABIE53_000704 -0.8
ABIE53_001401 -0.1
ABIE53_001620 -0.2
ABIE53_001644 -3.8
ABIE53_001824 -0.0
ABIE53_002025 -0.4
ABIE53_002155 +0.3
ABIE53_002824 -2.4
ABIE53_003156 -0.0
ABIE53_003249 +0.0
ABIE53_003335 -0.0
ABIE53_003700 -0.6
ABIE53_004166 +0.1
ABIE53_004257 +0.0
ABIE53_004572 +0.4
ABIE53_004905 +0.4
ABIE53_004906 -0.5
ABIE53_005883 +0.3
ABIE53_005919 +0.1
ABIE53_006487 -1.2

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information