MetaCyc Pathway: C4 photosynthetic carbon assimilation cycle, NAD-ME type in Pseudomonas fluorescens FW300-N2E3

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Reactions and Genes butyrate (C)
remove
Carbonate dehydratase (in reverse):
CO2 + H2O→hydrogen carbonate + H+ (EC 4.2.1.1)
AO353_10145 +0.0
AO353_10815 -0.1
AO353_14595 -0.7
AO353_25445 +0.2
AO353_27095 +0.1
Phosphoenolpyruvate carboxylase (in reverse):
hydrogen carbonate + phosphoenolpyruvate→oxaloacetate + phosphate (EC 4.1.1.31)
AO353_16310 -2.5
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1)
AO353_01120 +0.1
AO353_01210 -0.2
AO353_01655 +0.0
AO353_02295 +0.0
AO353_09180 -0.0
AO353_09990 -0.3
AO353_15915 -0.0
AO353_17700 -0.1
AO353_18575 +0.2
AO353_19150 +0.1
AO353_20995 -0.1
AO353_22840 -0.0
AO353_22920 +0.2
AO353_23080 -0.0
AO353_24850 -0.4
AO353_26890 +0.1
AO353_28150 +0.2
AO353_29325 -0.1
L-aspartate[in]→L-aspartate[out]
No genes
Aspartate transaminase:
L-aspartate + 2-oxoglutarate→oxaloacetate + L-glutamate (EC 2.6.1.1)
AO353_01120 +0.1
AO353_01210 -0.2
AO353_01655 +0.0
AO353_02295 +0.0
AO353_09180 -0.0
AO353_09990 -0.3
AO353_15915 -0.0
AO353_17700 -0.1
AO353_18575 +0.2
AO353_19150 +0.1
AO353_20995 -0.1
AO353_22840 -0.0
AO353_22920 +0.2
AO353_23080 -0.0
AO353_24850 -0.4
AO353_26890 +0.1
AO353_28150 +0.2
AO353_29325 -0.1
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38)
No genes
Malate dehydrogenase (oxaloacetate-decarboxylating):
(S)-malate + NAD+→CO2 + pyruvate + NADH (EC 1.1.1.38)
No genes
Alanine transaminase (in reverse):
pyruvate + L-glutamate→L-alanine + 2-oxoglutarate (EC 2.6.1.2)
AO353_03235 +0.1
AO353_19150 +0.1
L-alanine[in]→L-alanine[out]
No genes
Alanine transaminase (in reverse):
L-alanine + 2-oxoglutarate→pyruvate + L-glutamate (EC 2.6.1.2)
AO353_19150 +0.1
Pyruvate, phosphate dikinase:
pyruvate + ATP + phosphate→phosphoenolpyruvate + AMP + diphosphate + H+ (EC 2.7.9.1)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information