MetaCyc Pathway: L-arginine degradation V (arginine deiminase pathway) in Pseudomonas stutzeri RCH2

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Reactions and Genes Vanillin 2 mM
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Arginine deiminase:
L-arginine + H2O→L-citrulline + ammonium (EC 3.5.3.6)
Psest_0272 +0.1
Ornithine carbamoyltransferase (in reverse):
L-citrulline + H+ + phosphate→carbamoyl phosphate + L-ornithine (EC 2.1.3.3)
Psest_1291 N.D.
Psest_0271 +0.1
Carbamate kinase (in reverse):
carbamoyl phosphate + ADP→carbamate + ATP (EC 2.7.2.2; 6.3.4.16; 6.3.5.5)
Psest_0270 -0.2
Psest_0967 N.D.
Psest_0968 N.D.
carbamate + 2 H+→CO2 + ammonium (spontaneous) (EC 3.5.1.110; 3.5.1.20; 3.5.1.54; 4.2.1.104)
Psest_1540 +0.9
Psest_1541 +1.3
Psest_2352 -0.5
Psest_0777 -0.4

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information