MetaCyc Pathway: C4 photosynthetic carbon assimilation cycle, PEPCK type in Pseudomonas fluorescens FW300-N1B4

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Reactions and Genes L-Leucine (N)
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Carbonate dehydratase (in reverse):
CO2 + H2O→hydrogen carbonate + H+ (EC 4.2.1.1)
Pf1N1B4_1849 +0.1
Pf1N1B4_1986 +0.2
Pf1N1B4_2893 -0.0
Pf1N1B4_4440 -0.3
Phosphoenolpyruvate carboxylase (in reverse):
hydrogen carbonate + phosphoenolpyruvate→oxaloacetate + phosphate (EC 4.1.1.31)
Pf1N1B4_3051 +0.0
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1)
Pf1N1B4_160 -0.2
Pf1N1B4_2018 +0.1
Pf1N1B4_2139 -0.1
Pf1N1B4_261 +0.0
Pf1N1B4_3564 +0.3
Pf1N1B4_3771 -0.4
Pf1N1B4_386 +1.3
Pf1N1B4_4186 -0.2
Pf1N1B4_4425 +0.3
Pf1N1B4_4646 +0.1
Pf1N1B4_4672 N.D.
Pf1N1B4_4996 -0.1
Pf1N1B4_5070 +0.0
Pf1N1B4_510 +0.0
Pf1N1B4_5999 +0.0
Pf1N1B4_818 -0.2
Pf1N1B4_849 -0.1
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (in reverse):
oxaloacetate + NADPH + H+→(S)-malate + NADP+ (EC 1.1.1.40; 1.1.1.82)
Pf1N1B4_1545 -0.0
L-aspartate[in]→L-aspartate[out]
No genes
(S)-malate[in]→(S)-malate[out]
No genes
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)):
(S)-malate + NADP+→CO2 + pyruvate + NADPH (EC 1.1.1.40)
Pf1N1B4_1545 -0.0
Aspartate transaminase:
L-aspartate + 2-oxoglutarate→oxaloacetate + L-glutamate (EC 2.6.1.1)
Pf1N1B4_160 -0.2
Pf1N1B4_2018 +0.1
Pf1N1B4_2139 -0.1
Pf1N1B4_261 +0.0
Pf1N1B4_3564 +0.3
Pf1N1B4_3771 -0.4
Pf1N1B4_386 +1.3
Pf1N1B4_4186 -0.2
Pf1N1B4_4425 +0.3
Pf1N1B4_4646 +0.1
Pf1N1B4_4672 N.D.
Pf1N1B4_4996 -0.1
Pf1N1B4_5070 +0.0
Pf1N1B4_510 +0.0
Pf1N1B4_5999 +0.0
Pf1N1B4_818 -0.2
Pf1N1B4_849 -0.1
Alanine transaminase (in reverse):
pyruvate + L-glutamate→L-alanine + 2-oxoglutarate (EC 2.6.1.2)
Pf1N1B4_261 +0.0
Pf1N1B4_555 +0.0
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→CO2 + phosphoenolpyruvate + ADP (EC 4.1.1.49)
Pf1N1B4_1779 N.D.
L-alanine[in]→L-alanine[out]
No genes
phosphoenolpyruvate[in]→phosphoenolpyruvate[out]
No genes
Alanine transaminase (in reverse):
L-alanine + 2-oxoglutarate→pyruvate + L-glutamate (EC 2.6.1.2)
Pf1N1B4_261 +0.0
Pyruvate, phosphate dikinase:
pyruvate + ATP + phosphate→phosphoenolpyruvate + AMP + diphosphate + H+ (EC 2.7.9.1)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information