MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Pseudomonas fluorescens FW300-N1B4

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Reactions and Genes L-Leucine (N)
remove
geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)
No genes
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
Pf1N1B4_1065 -0.5
Pf1N1B4_160 -0.2
Pf1N1B4_2018 +0.1
Pf1N1B4_2139 -0.1
Pf1N1B4_261 +0.0
Pf1N1B4_27 -1.0
Pf1N1B4_349 -0.8
Pf1N1B4_3564 +0.3
Pf1N1B4_3771 -0.4
Pf1N1B4_386 +1.3
Pf1N1B4_4186 -0.2
Pf1N1B4_4425 +0.3
Pf1N1B4_4646 +0.1
Pf1N1B4_4672 N.D.
Pf1N1B4_4996 -0.1
Pf1N1B4_5070 +0.0
Pf1N1B4_510 +0.0
Pf1N1B4_5999 +0.0
Pf1N1B4_818 -0.2
Pf1N1B4_849 -0.1
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
Pf1N1B4_2747 +0.1
Pf1N1B4_5003 -0.3
all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)
No genes
2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information