MetaCyc Pathway: ammonia assimilation cycle III in Paraburkholderia bryophila 376MFSha3.1

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Reactions and Genes 2-Deoxy-D-Ribose 10 mM (C)
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Glutamate synthase (NADPH):
L-glutamine + H2O→ammonia + L-glutamate + H+ (EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)
H281DRAFT_00378 +0.2
H281DRAFT_00495 N.D.
H281DRAFT_00637 N.D.
H281DRAFT_01685 -0.2
H281DRAFT_02165 +0.0
H281DRAFT_02220 N.D.
H281DRAFT_02221 N.D.
H281DRAFT_02222 N.D.
H281DRAFT_02364 +0.1
H281DRAFT_03243 -0.3
H281DRAFT_03954 -1.4
H281DRAFT_03959 -0.2
H281DRAFT_04402 N.D.
H281DRAFT_04403 N.D.
H281DRAFT_04650 +0.1
H281DRAFT_04702 -0.1
H281DRAFT_05620 -4.3
H281DRAFT_05621 -2.6
H281DRAFT_05714 -3.4
H281DRAFT_05715 -4.5
H281DRAFT_05933 -0.0
H281DRAFT_05994 N.D.
H281DRAFT_06113 -0.1
Glutamate synthase (NADPH) (in reverse):
ammonia + 2-oxoglutarate + NADPH + 2 H+→L-glutamate + NADP+ + H2O (EC 1.4.1.13; 1.4.1.14)
H281DRAFT_00378 +0.2
H281DRAFT_03243 -0.3
H281DRAFT_05620 -4.3
H281DRAFT_05621 -2.6
H281DRAFT_05994 N.D.
Glutamate--ammonia ligase:
L-glutamate + ammonium + ATP→L-glutamine + ADP + H+ + phosphate (EC 6.3.1.2)
H281DRAFT_00452 N.D.
H281DRAFT_01081 +0.3
H281DRAFT_03844 -0.7

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information