MetaCyc Pathway: C4 photosynthetic carbon assimilation cycle, PEPCK type in Paraburkholderia bryophila 376MFSha3.1

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Reactions and Genes Deoxyribonucleic from herring sperm 10 mg/mL (C)
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Carbonate dehydratase (in reverse):
CO2 + H2O→hydrogen carbonate + H+ (EC 4.2.1.1)
H281DRAFT_00336 +0.4
H281DRAFT_01687 +0.2
H281DRAFT_02088 +1.5
H281DRAFT_02658 +0.0
H281DRAFT_02855 -1.0
H281DRAFT_04558 -0.3
Phosphoenolpyruvate carboxylase (in reverse):
hydrogen carbonate + phosphoenolpyruvate→oxaloacetate + phosphate (EC 4.1.1.31)
H281DRAFT_00197 -0.3
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1)
H281DRAFT_00273 -0.0
H281DRAFT_00432 +0.2
H281DRAFT_00809 -0.0
H281DRAFT_00920 -0.7
H281DRAFT_01048 -0.1
H281DRAFT_01557 -0.2
H281DRAFT_01577 +0.1
H281DRAFT_02293 -0.0
H281DRAFT_02907 +0.3
H281DRAFT_03132 -0.2
H281DRAFT_03686 -0.1
H281DRAFT_03705 -1.0
H281DRAFT_04024 +0.2
H281DRAFT_04101 +0.1
H281DRAFT_04597 -0.1
H281DRAFT_05051 +0.3
H281DRAFT_05099 -0.1
H281DRAFT_05339 +0.4
H281DRAFT_05564 +0.3
H281DRAFT_05880 +0.3
H281DRAFT_06094 +0.1
H281DRAFT_06439 -0.2
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (in reverse):
oxaloacetate + NADPH + H+→(S)-malate + NADP+ (EC 1.1.1.40; 1.1.1.82)
H281DRAFT_00026 -0.1
H281DRAFT_05846 +0.6
H281DRAFT_06308 -0.4
L-aspartate[in]→L-aspartate[out]
No genes
(S)-malate[in]→(S)-malate[out]
No genes
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)):
(S)-malate + NADP+→CO2 + pyruvate + NADPH (EC 1.1.1.40)
H281DRAFT_00026 -0.1
H281DRAFT_05846 +0.6
H281DRAFT_06308 -0.4
Aspartate transaminase:
L-aspartate + 2-oxoglutarate→oxaloacetate + L-glutamate (EC 2.6.1.1)
H281DRAFT_00273 -0.0
H281DRAFT_00432 +0.2
H281DRAFT_00809 -0.0
H281DRAFT_00920 -0.7
H281DRAFT_01048 -0.1
H281DRAFT_01557 -0.2
H281DRAFT_01577 +0.1
H281DRAFT_02293 -0.0
H281DRAFT_02907 +0.3
H281DRAFT_03132 -0.2
H281DRAFT_03686 -0.1
H281DRAFT_03705 -1.0
H281DRAFT_04024 +0.2
H281DRAFT_04101 +0.1
H281DRAFT_04597 -0.1
H281DRAFT_05051 +0.3
H281DRAFT_05099 -0.1
H281DRAFT_05339 +0.4
H281DRAFT_05564 +0.3
H281DRAFT_05880 +0.3
H281DRAFT_06094 +0.1
H281DRAFT_06439 -0.2
Alanine transaminase (in reverse):
pyruvate + L-glutamate→L-alanine + 2-oxoglutarate (EC 2.6.1.2)
H281DRAFT_00809 -0.0
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→CO2 + phosphoenolpyruvate + ADP (EC 4.1.1.49)
No genes
L-alanine[in]→L-alanine[out]
No genes
phosphoenolpyruvate[in]→phosphoenolpyruvate[out]
No genes
Alanine transaminase (in reverse):
L-alanine + 2-oxoglutarate→pyruvate + L-glutamate (EC 2.6.1.2)
H281DRAFT_00809 -0.0
Pyruvate, phosphate dikinase:
pyruvate + ATP + phosphate→phosphoenolpyruvate + AMP + diphosphate + H+ (EC 2.7.9.1)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information