MetaCyc Pathway: L-tyrosine degradation I in Bifidobacterium breve UCC2003

Add experiment(s):


Reactions and Genes Recovery broth with D-Cycloserine 0.4 mM
remove
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
BBR_RS13205 -0.7
BBR_RS13460 +0.1
BBR_RS14535 -0.2
BBR_RS15505 +0.3
BBR_RS15560 +1.8
BBR_RS17050 +0.3
BBR_RS17345 +0.0
BBR_RS17965 -0.1
BBR_RS19435 -0.6
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
No genes
Homogentisate 1,2-dioxygenase:
homogentisate + dioxygen→4-maleyl-acetoacetate + H+ (EC 1.13.11.5)
No genes
Maleylacetoacetate isomerase:
4-maleyl-acetoacetate→4-fumaryl-acetoacetate (EC 5.2.1.2)
No genes
Fumarylacetoacetase:
4-fumaryl-acetoacetate + H2O→acetoacetate + fumarate + H+ (EC 3.7.1.2)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information