MetaCyc Pathway: ammonia assimilation cycle III in Sinorhizobium meliloti 1021

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Reactions and Genes Polymyxin B sulfate 0.00005 mg/ml
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Glutamate synthase (NADPH):
L-glutamine + H2O→ammonia + L-glutamate + H+ (EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)
SM_b20481 -0.1
SM_b20528 -0.2
SM_b20652 +0.4
SM_b21227 -0.5
SMa1377 -0.2
SMc00394 N.D.
SMc00486 +0.1
SMc01025 N.D.
SMc01215 -2.1
SMc01350 N.D.
SMc01352 N.D.
SMc01353 N.D.
SMc01569 -2.0
SMc01814 +0.5
SMc02611 +0.2
SMc02612 -0.2
SMc02725 +0.3
SMc02847 -0.2
SMc02881 +0.3
SMc03236 -0.0
SMc03245 +0.2
SMc03943 +0.6
SMc04013 +0.6
SMc04026 -0.1
SMc04028 -0.3
Glutamate synthase (NADPH) (in reverse):
ammonia + 2-oxoglutarate + NADPH + 2 H+→L-glutamate + NADP+ + H2O (EC 1.4.1.13; 1.4.1.14)
SM_b20528 -0.2
SMc01814 +0.5
SMc02611 +0.2
SMc02612 -0.2
SMc02847 -0.2
SMc04026 -0.1
SMc04028 -0.3
Glutamate--ammonia ligase:
L-glutamate + ammonium + ATP→L-glutamine + ADP + H+ + phosphate (EC 6.3.1.2)
SM_b20745 -0.1
SMc00762 -0.3
SMc00948 -1.4
SMc01594 -0.2
SMc01973 +0.8
SMc02352 -0.4
SMc02613 -0.5

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information