MetaCyc Pathway: trehalose degradation V in Bifidobacterium breve UCC2003

Add experiment(s):


Reactions and Genes Recovery broth with Bicyclomycin 0.07 mM
remove
Alpha,alpha-trehalose phosphorylase (configuration-retaining):
α,α-trehalose + phosphate→α-D-glucopyranose + α-D-glucopyranose 1-phosphate (EC 2.4.1.231)
No genes
Hexokinase:
D-glucopyranose + ATP→D-glucopyranose 6-phosphate + ADP + H+ (EC 2.7.1.1; 2.7.1.2)
BBR_RS11100 +0.1
BBR_RS18130 +8.0
BBR_RS18495 +0.3
Phosphoglucomutase:
α-D-glucopyranose 1-phosphate→D-glucopyranose 6-phosphate (EC 5.4.2.2)
BBR_RS13010 N.D.
BBR_RS14220 +0.3
BBR_RS18705 N.D.

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information