MetaCyc Pathway: fatty acid β-oxidation IV (unsaturated, even number) in Sphingomonas koreensis DSMZ 15582

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Reactions and Genes Choline chloride 40 mM
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3-hydroxybutyryl-CoA epimerase:
a 2,3,4-saturated (3R)-3-hydroxyacyl-CoA→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 5.1.2.3)
Ga0059261_0837 -0.1
Ga0059261_2827 -0.1
a (2E,4Z)-2,4-dienoyl-CoA + NADPH + H+→a (3E)-3-enoyl-CoA + NADP+ (EC 1.3.1.124)
No genes
a 2,3,4-saturated (3R)-3-hydroxyacyl-CoA→a (2E)-2-enoyl-CoA + H2O (EC 4.2.1.119)
No genes
Dodecenoyl-CoA isomerase:
a (3E)-3-enoyl-CoA→a (2E)-2-enoyl-CoA
(EC 5.3.3.8)
Ga0059261_0837 -0.1
Ga0059261_2827 -0.1
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 4.2.1.17)
Ga0059261_0515 +0.1
Ga0059261_0837 -0.1
Ga0059261_2159 -0.0
Ga0059261_2668 +0.1
Ga0059261_2803 -0.1
Ga0059261_2815 -0.0
Ga0059261_2818 +0.1
Ga0059261_2827 -0.1
Ga0059261_2840 +0.0
Ga0059261_2847 -0.1
Ga0059261_2858 -0.2
Ga0059261_2861 +0.0
Ga0059261_2887 +0.1
Ga0059261_2902 -0.0
Ga0059261_2908 -0.1
Ga0059261_3683 -1.1
Ga0059261_3685 -3.0
Ga0059261_3986 +0.1
Ga0059261_4214 -0.1
Ga0059261_4222 -0.1

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information