MetaCyc Pathway: adipate biosynthesis in Sphingomonas koreensis DSMZ 15582

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Reactions and Genes 5-Hydroxymethylfurfural 2.5 mM
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3-oxoadipyl-CoA thiolase:
acetyl-CoA + succinyl-CoA→3-oxoadipoyl-CoA + coenzyme A (EC 2.3.1.174)
No genes
3-hydroxyacyl-CoA dehydrogenase (in reverse):
3-oxoadipoyl-CoA + NADH + H+→(3S)-hydroxyadipyl-CoA + NAD+ (EC 1.1.1.35)
Ga0059261_0837 -0.2
Ga0059261_2534 -0.6
Ga0059261_2816 -0.1
Ga0059261_2827 -0.0
Enoyl-CoA hydratase:
(3S)-hydroxyadipyl-CoA→(2E)-5-carboxy-2-pentenoyl-CoA + H2O (EC 4.2.1.17)
Ga0059261_0515 +0.1
Ga0059261_0837 -0.2
Ga0059261_2159 -0.1
Ga0059261_2668 +0.0
Ga0059261_2803 -0.1
Ga0059261_2815 -0.1
Ga0059261_2818 -0.0
Ga0059261_2827 -0.0
Ga0059261_2840 -0.4
Ga0059261_2847 +0.0
Ga0059261_2858 +0.1
Ga0059261_2861 -0.1
Ga0059261_2887 -0.2
Ga0059261_2902 +0.0
Ga0059261_2908 -0.0
Ga0059261_3683 -1.0
Ga0059261_3685 -2.3
Ga0059261_3986 +0.0
Ga0059261_4214 -0.6
Ga0059261_4222 +0.0
(2E)-5-carboxy-2-pentenoyl-CoA + FADH2→adipoyl-CoA + FAD + H+
Ga0059261_3681 -0.1
Succinate--CoA ligase (ADP-forming) (in reverse):
adipoyl-CoA + ADP + phosphate→adipate + ATP + coenzyme A (EC 6.2.1.5)
Ga0059261_1340 N.D.
Ga0059261_2278 N.D.

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information