MetaCyc Pathway: S-methyl-5-thio-α-D-ribose 1-phosphate degradation III in Rhodopseudomonas palustris CGA009

Add experiment(s):


Reactions and Genes PM_argon75_N2O25 butyrate and Chloride 0.1 mM
remove
S-methyl-5-thioribose-1-phosphate isomerase:
S-methyl-5-thio-α-D-ribose 1-phosphate→S-methyl-5-thio-D-ribulose 1-phosphate (EC 5.3.1.23)
TX73_025050 +1.5
S-methyl-5-thio-D-ribulose 1-phosphate→(2-methylsulfanyl)acetaldehyde + glycerone phosphate (EC 4.1.2.62)
No genes
(2-methylsulfanyl)acetaldehyde + NADH + H+→(2-methylsulfanyl)ethanol + NAD+
No genes
(2-methylsulfanyl)ethanol + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→methanethiol + ethene + 2 an oxidized ferredoxin [iron-sulfur] cluster + H2O (EC 1.18.98.M1)
TX73_012135 -0.3
TX73_012165 -0.1
TX73_012220 +0.2
TX73_013540 -0.1
TX73_013645 +0.1
TX73_013655 -0.1
O-acetylhomoserine aminocarboxypropyltransferase:
methanethiol + O-acetyl-L-homoserine→L-methionine + acetate + H+ (EC 2.5.1.49)
TX73_008060 +0.1
TX73_012145 -0.3
TX73_012150 -0.2
TX73_012210 -0.0
TX73_014315 +0.2
TX73_014320 +0.1
TX73_022025 +0.0
TX73_023845 +0.1
TX73_024775 -3.4

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information