MetaCyc Pathway: superpathway of L-phenylalanine biosynthesis in Dyella japonica UNC79MFTsu3.2

Reactions and Genes	L-Isoleucine (N)
3-deoxy-7-phosphoheptulonate synthase: D-erythrose 4-phosphate + phosphoenolpyruvate + H2O→3-deoxy-D-arabino-heptulosonate 7-phosphate + phosphate (EC 2.5.1.54)
ABZR86_RS00390	-0.2
ABZR86_RS14275	+0.2
ABZR86_RS21770	+0.2
3-dehydroquinate synthase: 3-deoxy-D-arabino-heptulosonate 7-phosphate→3-dehydroquinate + phosphate (EC 4.2.3.4)
ABZR86_RS10480	-2.9
3-dehydroquinate dehydratase: 3-dehydroquinate→3-dehydroshikimate + H2O (EC 4.2.1.10)
ABZR86_RS06630	-3.7
ABZR86_RS17085	-3.2
Shikimate dehydrogenase (in reverse): 3-dehydroshikimate + NADPH + H+→shikimate + NADP+ (EC 1.1.1.25)
ABZR86_RS14985	-3.3
ABZR86_RS16880	-0.3
Shikimate kinase: shikimate + ATP→shikimate 3-phosphate + ADP + H+ (EC 2.7.1.71)
ABZR86_RS10475	-3.4
3-phosphoshikimate 1-carboxyvinyltransferase: shikimate 3-phosphate + phosphoenolpyruvate→5-enolpyruvoyl-shikimate 3-phosphate + phosphate (EC 2.5.1.19)
ABZR86_RS02230	-4.4
Chorismate synthase: 5-enolpyruvoyl-shikimate 3-phosphate→chorismate + phosphate (EC 4.2.3.5)
ABZR86_RS08040	-3.5
Chorismate mutase: chorismate→prephenate (EC 5.4.99.5)
ABZR86_RS02225	-3.4
Prephenate dehydratase: prephenate + H+→3-phenyl-2-oxopropanoate + CO2 + H2O (EC 4.2.1.51)
ABZR86_RS02225	-3.4
Aspartate transaminase (in reverse): 3-phenyl-2-oxopropanoate + L-glutamate→L-phenylalanine + 2-oxoglutarate (EC 2.6.1.1; 2.6.1.27; 2.6.1.57)
ABZR86_RS01145	+0.1
ABZR86_RS02120	-0.1
ABZR86_RS03710	+0.1
ABZR86_RS04055	+0.1
ABZR86_RS06725	-2.8
ABZR86_RS08550	-0.1
ABZR86_RS11580	-1.5
ABZR86_RS11705	-0.0
ABZR86_RS12435	-3.5
ABZR86_RS14075	-0.0
ABZR86_RS15965	-1.6
ABZR86_RS16490	-0.2
ABZR86_RS17110	-0.1
ABZR86_RS20415	-0.2

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information