MetaCyc Pathway: creatinine degradation II in Burkholderia phytofirmans PsJN

Add experiment(s):


Reactions and Genes Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
remove
Creatinine deaminase:
creatinine + H+ + H2ON-methylhydantoin + ammonium
(EC 3.5.4.21)
No genes
N-methylhydantoinase (ATP-hydrolyzing):
N-methylhydantoin + ATP + 2 H2ON-carbamoylsarcosine + ADP + 2 H+ + phosphate
(EC 3.5.2.14)
BPHYT_RS32325 +0.5
BPHYT_RS32330 -0.0
N-carbamoylsarcosine amidase:
N-carbamoylsarcosine + 2 H+ + H2O→sarcosine + ammonium + CO2
(EC 3.5.1.59)
No genes
sarcosine + an oxidized electron-transfer flavoprotein + H+ + H2O→glycine + a reduced electron-transfer flavoprotein + formaldehyde (EC 1.5.8.3)
No genes
Sarcosine oxidase:
sarcosine + dioxygen + H2O→glycine + formaldehyde + hydrogen peroxide
(EC 1.5.3.1)
BPHYT_RS09370 -0.0
BPHYT_RS09375 -2.2
BPHYT_RS21990 -0.2
BPHYT_RS24345 N.D.
BPHYT_RS25105 +0.2
BPHYT_RS25110 +1.1
BPHYT_RS25115 -0.3
BPHYT_RS25120 N.D.
BPHYT_RS30165 -0.0
BPHYT_RS32315 N.D.
BPHYT_RS32645 +0.2
BPHYT_RS35025 -0.5

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information