MetaCyc Pathway: Fe(II) oxidation in Rhodopseudomonas palustris CGA009

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Reactions and Genes PM with succinate aerobic in dark
remove
Fe2+[out] + an oxidized rusticyanin[in]→a reduced rusticyanin[in] + Fe3+[out] (EC 1.16.9.1)
No genes
a reduced rusticyanin[out] + an oxidized Cyc1 cytochrome[out]→a reduced Cyc1 cytochrome[out] + an oxidized rusticyanin[out]
No genes
a reduced rusticyanin[out] + an oxidized CycA1 cytochrome[out]→a reduced CycA1 cytochrome[out] + an oxidized rusticyanin[out]
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
TX73_000085 -1.0
TX73_000090 -0.5
TX73_000095 -1.4
TX73_000100 -1.1
TX73_004285 -1.0
TX73_004290 -0.6
TX73_004295 -0.5
TX73_004310 -0.9
a ubiquinol + 2 an oxidized CycA1 cytochrome[out] + 2 H+[in]→2 a reduced CycA1 cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
a ubiquinol + NAD+[in] + 4 H+[out]→NADH[in] + 5 H+[in] + a ubiquinone (EC 7.1.1.2)
TX73_005675 -0.1
TX73_015220 N.D.
TX73_015225 N.D.
TX73_015230 N.D.
TX73_015235 N.D.
TX73_015240 -1.5
TX73_015245 -0.8
TX73_015250 N.D.
TX73_015255 N.D.
TX73_015260 N.D.
TX73_015270 +0.2
TX73_015280 N.D.
TX73_015290 N.D.
TX73_015295 N.D.
TX73_016630 +0.1
TX73_022030 +0.0
TX73_022035 +0.2
TX73_022040 +0.2
TX73_022045 -0.2
TX73_022050 +0.3
TX73_022055 -0.1
TX73_022060 -0.1
TX73_022065 +0.1
TX73_022070 +0.2
TX73_022075 -0.0
TX73_022080 +0.2
TX73_022085 -0.1
TX73_022090 -0.1

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information