| Reactions and Genes | L-Lysine (C) |
|---|
| remove |
| a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate |
| No genes |
Dodecenoyl-CoA isomerase:
a (3Z)-3-enoyl-CoA→a (2E)-2-enoyl-CoA (EC 5.3.3.8) |
| AO356_02330 | N.D. |
| AO356_10120 | -0.0 |
| AO356_30295 | +0.2 |
3-hydroxybutyryl-CoA epimerase:
a 2,3,4-saturated (3R)-3-hydroxyacyl-CoA→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 5.1.2.3) |
| AO356_02330 | N.D. |
| AO356_10120 | -0.0 |
| AO356_20400 | +0.0 |
| AO356_30295 | +0.2 |
| a 2,3,4-saturated fatty acyl CoA + an oxidized electron-transfer flavoprotein + H+→a (2E)-2-enoyl-CoA + a reduced electron-transfer flavoprotein |
| No genes |
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 4.2.1.17) |
| AO356_02330 | N.D. |
| AO356_04640 | +0.0 |
| AO356_10120 | -0.0 |
| AO356_12440 | +0.0 |
| AO356_17825 | +0.2 |
| AO356_20400 | +0.0 |
| AO356_20420 | N.D. |
| AO356_25890 | -0.4 |
| AO356_26360 | -0.8 |
| AO356_26370 | -0.1 |
| AO356_26645 | +0.1 |
| AO356_27920 | -0.2 |
| AO356_30295 | +0.2 |
| AO356_30355 | -0.3 |
| AO356_30360 | -0.2 |
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+ (EC 1.1.1.35) |
| AO356_02330 | N.D. |
| AO356_10120 | -0.0 |
| AO356_13845 | +0.0 |
| AO356_20400 | +0.0 |
| AO356_30295 | +0.2 |
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA (EC 2.3.1.16) |
| AO356_02325 | -1.8 |
| AO356_03560 | -0.2 |
| AO356_04930 | -0.6 |
| AO356_08090 | -0.3 |
| AO356_20395 | +0.5 |
| AO356_21640 | -4.3 |
| AO356_26350 | +0.9 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information