MetaCyc Pathway: C4 photosynthetic carbon assimilation cycle, NAD-ME type in Burkholderia phytofirmans PsJN

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Reactions and Genes m-Inositol (C)
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Carbonate dehydratase (in reverse):
CO2 + H2O→hydrogen carbonate + H+ (EC 4.2.1.1)
BPHYT_RS02235 +0.0
BPHYT_RS05345 N.D.
BPHYT_RS05395 -0.5
BPHYT_RS06580 +0.0
BPHYT_RS07445 N.D.
BPHYT_RS10640 N.D.
BPHYT_RS23470 N.D.
BPHYT_RS26595 -0.1
BPHYT_RS26600 N.D.
Phosphoenolpyruvate carboxylase (in reverse):
hydrogen carbonate + phosphoenolpyruvate→oxaloacetate + phosphate (EC 4.1.1.31)
BPHYT_RS05225 -5.0
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1)
BPHYT_RS00155 +0.1
BPHYT_RS04100 N.D.
BPHYT_RS05430 -0.0
BPHYT_RS05975 -0.1
BPHYT_RS06770 +0.1
BPHYT_RS08040 +0.4
BPHYT_RS08950 -1.5
BPHYT_RS09580 +0.2
BPHYT_RS10265 -0.2
BPHYT_RS10440 +0.6
BPHYT_RS13065 +0.1
BPHYT_RS13450 +0.0
BPHYT_RS15405 -0.0
BPHYT_RS15820 -0.0
BPHYT_RS21060 -0.0
BPHYT_RS21560 -2.4
BPHYT_RS21610 +0.0
BPHYT_RS21730 -0.1
BPHYT_RS22065 -0.0
BPHYT_RS22425 +0.3
BPHYT_RS26535 -0.3
BPHYT_RS27000 +0.1
BPHYT_RS28370 -0.4
BPHYT_RS28685 -0.1
BPHYT_RS28695 -0.0
BPHYT_RS30590 -0.5
BPHYT_RS30680 +0.0
BPHYT_RS35285 -0.1
L-aspartate[in]→L-aspartate[out]
No genes
Aspartate transaminase:
L-aspartate + 2-oxoglutarate→oxaloacetate + L-glutamate (EC 2.6.1.1)
BPHYT_RS00155 +0.1
BPHYT_RS04100 N.D.
BPHYT_RS05430 -0.0
BPHYT_RS05975 -0.1
BPHYT_RS06770 +0.1
BPHYT_RS08040 +0.4
BPHYT_RS08950 -1.5
BPHYT_RS09580 +0.2
BPHYT_RS10265 -0.2
BPHYT_RS10440 +0.6
BPHYT_RS13065 +0.1
BPHYT_RS13450 +0.0
BPHYT_RS15405 -0.0
BPHYT_RS15820 -0.0
BPHYT_RS21060 -0.0
BPHYT_RS21560 -2.4
BPHYT_RS21610 +0.0
BPHYT_RS21730 -0.1
BPHYT_RS22065 -0.0
BPHYT_RS22425 +0.3
BPHYT_RS26535 -0.3
BPHYT_RS27000 +0.1
BPHYT_RS28370 -0.4
BPHYT_RS28685 -0.1
BPHYT_RS28695 -0.0
BPHYT_RS30590 -0.5
BPHYT_RS30680 +0.0
BPHYT_RS35285 -0.1
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38)
BPHYT_RS27110 -0.0
BPHYT_RS28460 +0.2
BPHYT_RS33955 N.D.
Malate dehydrogenase (oxaloacetate-decarboxylating):
(S)-malate + NAD+→CO2 + pyruvate + NADH (EC 1.1.1.38)
No genes
Alanine transaminase (in reverse):
pyruvate + L-glutamate→L-alanine + 2-oxoglutarate (EC 2.6.1.2)
BPHYT_RS08950 -1.5
L-alanine[in]→L-alanine[out]
No genes
Alanine transaminase (in reverse):
L-alanine + 2-oxoglutarate→pyruvate + L-glutamate (EC 2.6.1.2)
BPHYT_RS08950 -1.5
Pyruvate, phosphate dikinase:
pyruvate + ATP + phosphate→phosphoenolpyruvate + AMP + diphosphate + H+ (EC 2.7.9.1)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information