MetaCyc Pathway: superpathway of L-alanine biosynthesis in Herbaspirillum seropedicae SmR1

Add experiment(s):


Reactions and Genes L-Proline (N)
remove
Alanine transaminase (in reverse):
pyruvate + L-glutamate→L-alanine + 2-oxoglutarate (EC 2.6.1.2)
HSERO_RS10455 -2.4
HSERO_RS12800 -1.8
Branched-chain-amino-acid transaminase (in reverse):
3-methyl-2-oxobutanoate + L-glutamate→L-valine + 2-oxoglutarate (EC 2.6.1.42)
HSERO_RS03330 +0.1
Cysteine desulfurase:
L-cysteine + an unsulfurated [sulfur carrier]→L-alanine + a sulfurated [sulfur carrier] (EC 2.8.1.7)
HSERO_RS07855 +0.3
HSERO_RS11675 +0.2
HSERO_RS14180 -0.1
HSERO_RS14350 +0.0
HSERO_RS15770 N.D.
Valine--pyruvate transaminase:
L-valine + pyruvate→3-methyl-2-oxobutanoate + L-alanine (EC 2.6.1.66)
HSERO_RS09050 -2.1
HSERO_RS10455 -2.4

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information