MetaCyc Pathway: superpathway of L-tyrosine biosynthesis in Sinorhizobium meliloti 1021

Add experiment(s):


Reactions and Genes D-Cycloserine 0.05 mg/ml
remove
3-deoxy-7-phosphoheptulonate synthase:
D-erythrose 4-phosphate + phosphoenolpyruvate + H2O→3-deoxy-D-arabino-heptulosonate 7-phosphate + phosphate
(EC 2.5.1.54)
SMc00155 N.D.
3-dehydroquinate synthase:
3-deoxy-D-arabino-heptulosonate 7-phosphate→3-dehydroquinate + phosphate
(EC 4.2.3.4)
SMc00696 N.D.
3-dehydroquinate dehydratase:
3-dehydroquinate→3-dehydroshikimate + H2O
(EC 4.2.1.10)
SMc01028 -0.1
SMc01343 N.D.
Shikimate dehydrogenase (in reverse):
3-dehydroshikimate + NADPH + H+→shikimate + NADP+
(EC 1.1.1.25)
SM_b20037 -0.3
SMc02791 N.D.
Shikimate kinase:
shikimate + ATP→shikimate 3-phosphate + ADP + H+
(EC 2.7.1.71)
SMc00695 N.D.
3-phosphoshikimate 1-carboxyvinyltransferase:
shikimate 3-phosphate + phosphoenolpyruvate→5-enolpyruvoyl-shikimate 3-phosphate + phosphate
(EC 2.5.1.19)
SMc00333 N.D.
Chorismate synthase:
5-enolpyruvoyl-shikimate 3-phosphate→chorismate + phosphate
(EC 4.2.3.5)
SMc00007 N.D.
Chorismate mutase:
chorismate→prephenate
(EC 5.4.99.5)
SMc03858 N.D.
Prephenate dehydrogenase:
prephenate + NAD+→3-(4-hydroxyphenyl)pyruvate + CO2 + NADH
(EC 1.3.1.12)
SMc00711 +5.1
Aspartate transaminase (in reverse):
3-(4-hydroxyphenyl)pyruvate + L-glutamate→L-tyrosine + 2-oxoglutarate
(EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
SM_b20039 -2.2
SMa0387 +0.1
SMc00294 +0.1
SMc00387 +0.0
SMc00490 +0.1
SMc00710 +2.6
SMc01406 -0.2
SMc01578 -0.4
SMc01969 -0.7
SMc02251 -0.1
SMc02262 -0.0
SMc02393 -0.0
SMc03885 -0.1
SMc04323 +0.1
SMc04326 -0.1
SMc04386 -0.5

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information