MetaCyc Pathway: β-(1,4)-mannan degradation in Burkholderia phytofirmans PsJN

Add experiment(s):


Reactions and Genes Lomefloxacin 0.001 mM
remove
Mannan 1,4-mannobiosidase:
a (1,4)-β-D-mannan + n H2O→n-1 β-1,4-D-mannobiose (EC 3.2.1.100)
No genes
Mannan endo-1,4-beta-mannosidase:
a (1,4)-β-D-mannan + H2O→2 a β-(1,4)-mannan oligosaccharide (EC 3.2.1.78)
No genes
a β-(1,4)-mannan oligosaccharide + phosphate→a β-(1,4)-mannan oligosaccharide + α-D-mannose 1-phosphate (EC 2.4.1.319)
No genes
Cellobiose epimerase:
β-1,4-D-mannobiose→β-D-mannosyl-(1→4)-D-glucose (EC 5.1.3.11)
No genes
β-D-mannosyl-(1→4)-D-glucose + phosphate→α-D-mannose 1-phosphate + D-glucopyranose (EC 2.4.1.281)
No genes
Phosphomannomutase:
α-D-mannose 1-phosphate→D-mannopyranose 6-phosphate (EC 5.4.2.8)
BPHYT_RS04470 N.D.
Mannose-6-phosphate isomerase:
D-mannopyranose 6-phosphate→β-D-fructofuranose 6-phosphate (EC 5.3.1.8)
BPHYT_RS03980 -0.1
BPHYT_RS04415 -0.2
BPHYT_RS08530 N.D.
BPHYT_RS09705 -0.3
BPHYT_RS11350 N.D.
BPHYT_RS13015 N.D.
BPHYT_RS29610 +0.1
BPHYT_RS31080 N.D.
BPHYT_RS34175 +1.2
BPHYT_RS34950 N.D.

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information