MetaCyc Pathway: C4 photosynthetic carbon assimilation cycle, NAD-ME type in Herbaspirillum seropedicae SmR1

Reactions and Genes	m-Inositol (C)
Carbonate dehydratase (in reverse): CO2 + H2O→hydrogen carbonate + H+ (EC 4.2.1.1)
HSERO_RS16260	-0.2
HSERO_RS16790	-0.0
Phosphoenolpyruvate carboxylase (in reverse): hydrogen carbonate + phosphoenolpyruvate→oxaloacetate + phosphate (EC 4.1.1.31)
HSERO_RS14670	-5.1
Aspartate transaminase (in reverse): oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate (EC 2.6.1.1)
HSERO_RS05425	+0.3
HSERO_RS08395	-0.1
HSERO_RS08705	-0.1
HSERO_RS09025	+0.3
HSERO_RS10455	-3.0
HSERO_RS12210	-0.7
HSERO_RS14160	+0.2
HSERO_RS15115	-0.0
HSERO_RS15220	+0.2
HSERO_RS17885	-0.2
HSERO_RS23235	-1.1
L-aspartate[in]→L-aspartate[out]
No genes
Aspartate transaminase: L-aspartate + 2-oxoglutarate→oxaloacetate + L-glutamate (EC 2.6.1.1)
HSERO_RS05425	+0.3
HSERO_RS08395	-0.1
HSERO_RS08705	-0.1
HSERO_RS09025	+0.3
HSERO_RS10455	-3.0
HSERO_RS12210	-0.7
HSERO_RS14160	+0.2
HSERO_RS15115	-0.0
HSERO_RS15220	+0.2
HSERO_RS17885	-0.2
HSERO_RS23235	-1.1
Malate dehydrogenase (in reverse): oxaloacetate + NADH + H+→(S)-malate + NAD+ (EC 1.1.1.37; 1.1.1.38)
HSERO_RS14925	N.D.
HSERO_RS16685	-0.0
Malate dehydrogenase (oxaloacetate-decarboxylating): (S)-malate + NAD+→CO2 + pyruvate + NADH (EC 1.1.1.38)
No genes
Alanine transaminase (in reverse): pyruvate + L-glutamate→L-alanine + 2-oxoglutarate (EC 2.6.1.2)
HSERO_RS10455	-3.0
HSERO_RS12800	-0.6
L-alanine[in]→L-alanine[out]
No genes
Alanine transaminase (in reverse): L-alanine + 2-oxoglutarate→pyruvate + L-glutamate (EC 2.6.1.2)
HSERO_RS10455	-3.0
Pyruvate, phosphate dikinase: pyruvate + ATP + phosphate→phosphoenolpyruvate + AMP + diphosphate + H+ (EC 2.7.9.1)
No genes

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information