MetaCyc Pathway: ammonia assimilation cycle III in Pseudomonas fluorescens FW300-N2E2

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Reactions and Genes D-Galactose (C)
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Glutamate synthase (NADPH):
L-glutamine + H2O→ammonia + L-glutamate + H+ (EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)
Pf6N2E2_1327 +0.1
Pf6N2E2_1717 +0.0
Pf6N2E2_1718 +0.1
Pf6N2E2_1828 -0.1
Pf6N2E2_2102 -0.3
Pf6N2E2_2224 -0.6
Pf6N2E2_2471 +1.7
Pf6N2E2_2542 -0.0
Pf6N2E2_2604 -0.1
Pf6N2E2_2840 +1.5
Pf6N2E2_2847 +0.0
Pf6N2E2_2929 -0.3
Pf6N2E2_3050 N.D.
Pf6N2E2_3151 +1.0
Pf6N2E2_3164 N.D.
Pf6N2E2_3288 N.D.
Pf6N2E2_3289 N.D.
Pf6N2E2_3290 N.D.
Pf6N2E2_3364 N.D.
Pf6N2E2_3365 N.D.
Pf6N2E2_3403 -0.2
Pf6N2E2_3707 N.D.
Pf6N2E2_3751 -3.8
Pf6N2E2_3752 -3.9
Pf6N2E2_4822 +1.3
Pf6N2E2_4824 +0.2
Pf6N2E2_4916 +0.4
Pf6N2E2_497 -0.4
Pf6N2E2_5461 +0.6
Pf6N2E2_5644 +0.2
Pf6N2E2_5756 -0.3
Pf6N2E2_6001 -0.0
Pf6N2E2_6056 +0.1
Glutamate synthase (NADPH) (in reverse):
ammonia + 2-oxoglutarate + NADPH + 2 H+→L-glutamate + NADP+ + H2O (EC 1.4.1.13; 1.4.1.14)
Pf6N2E2_1327 +0.1
Pf6N2E2_1828 -0.1
Pf6N2E2_2224 -0.6
Pf6N2E2_2471 +1.7
Pf6N2E2_2604 -0.1
Pf6N2E2_2840 +1.5
Pf6N2E2_2847 +0.0
Pf6N2E2_2929 -0.3
Pf6N2E2_3151 +1.0
Pf6N2E2_3751 -3.8
Pf6N2E2_3752 -3.9
Pf6N2E2_4916 +0.4
Pf6N2E2_497 -0.4
Pf6N2E2_5756 -0.3
Glutamate--ammonia ligase:
L-glutamate + ammonium + ATP→L-glutamine + ADP + H+ + phosphate (EC 6.3.1.2)
Pf6N2E2_2177 -0.3
Pf6N2E2_2730 +0.1
Pf6N2E2_3821 N.D.
Pf6N2E2_4509 -0.2
Pf6N2E2_4511 -1.0
Pf6N2E2_5686 +0.0

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information