MetaCyc Pathway: fatty acid salvage in Pseudomonas stutzeri RCH2

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Reactions and Genes butyrate (C)
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Butyrate--CoA ligase:
decanoate + ATP + coenzyme A→decanoyl-CoA + AMP + diphosphate (EC 6.2.1.2; 6.2.1.3)
Psest_1086 +0.6
Psest_1334 -0.4
Psest_1335 +0.4
Psest_2477 -0.0
decanoyl-CoA + an oxidized electron-transfer flavoprotein + H+→(2E)-dec-2-enoyl-CoA + a reduced electron-transfer flavoprotein (EC 1.3.8.7)
Psest_2728 +0.1
Psest_3968 -0.9
Psest_0417 +2.7
Psest_0419 -3.6
Psest_0539 +0.8
Long-chain-enoyl-CoA hydratase (in reverse):
(2E)-dec-2-enoyl-CoA + H2O→(S)-3-hydroxydecanoyl-CoA (EC 4.2.1.74)
Psest_2654 N.D.
Psest_3969 +0.1
Psest_4235 +0.5
3-hydroxyacyl-CoA dehydrogenase:
(S)-3-hydroxydecanoyl-CoA + NAD+→3-oxodecanoyl-CoA + NADH + H+ (EC 1.1.1.35)
Psest_2654 N.D.
Psest_3109 +0.2
Psest_3800 +0.2
Psest_3969 +0.1
Psest_4235 +0.5
Acetyl-CoA C-acyltransferase (in reverse):
3-oxodecanoyl-CoA + coenzyme A→octanoyl-CoA + acetyl-CoA (EC 2.3.1.16)
Psest_1076 -1.1
Psest_1829 -0.1
Psest_2446 +1.0
Psest_2476 +0.4
Psest_2653 N.D.
Psest_3070 +0.3
octanoyl-CoA + a malonyl-[acp] + H+→a 3-oxodecanoyl-[acp] + CO2 + coenzyme A (EC 2.3.1.207)
Psest_1462 +0.7

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information