MetaCyc Pathway: L-arginine degradation III (arginine decarboxylase/agmatinase pathway) in Pseudomonas stutzeri RCH2
| Reactions and Genes | L-Alanine (N) |
|---|---|
| remove | |
| Arginine decarboxylase: L-arginine + H+→agmatine + CO2 (EC 4.1.1.19) | |
| Psest | +0.1 |
| Psest | +0.0 |
| Psest | +1.0 |
| Agmatinase: agmatine + H2O→putrescine + urea (EC 3.5.3.11) | |
| No genes | |
Links:
- Pathway details at MetaCyc
- Fitness data for 3 genes
- All MetaCyc pathways for Pseudomonas stutzeri RCH2
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information