MetaCyc Pathway: aerobic respiration II (cytochrome c) (yeast) in Burkholderia phytofirmans PsJN

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Reactions and Genes Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
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NADH[in] + H+[in] + a ubiquinone→a ubiquinol + NAD+[in] (EC 1.6.5.9)
No genes
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
BPHYT_RS33935 N.D.
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
BPHYT_RS02640 -1.5
BPHYT_RS02645 N.D.
BPHYT_RS02665 -2.0
BPHYT_RS10055 N.D.
BPHYT_RS10060 -0.0
BPHYT_RS10065 -1.3
BPHYT_RS10070 +1.5

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information