MetaCyc Pathway: superpathway of L-aspartate and L-asparagine biosynthesis in Burkholderia phytofirmans PsJN

Add experiment(s):


Reactions and Genes Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
remove
Aspartate transaminase (in reverse):
oxaloacetate + L-glutamate→L-aspartate + 2-oxoglutarate
(EC 2.6.1.1)
BPHYT_RS00155 -0.7
BPHYT_RS04100 N.D.
BPHYT_RS05430 +0.1
BPHYT_RS05975 -0.2
BPHYT_RS06770 -0.2
BPHYT_RS08040 -0.2
BPHYT_RS08950 -1.0
BPHYT_RS09580 +0.1
BPHYT_RS10265 -0.3
BPHYT_RS10440 -0.3
BPHYT_RS13065 +0.1
BPHYT_RS13450 -0.3
BPHYT_RS15405 +0.1
BPHYT_RS15820 +0.2
BPHYT_RS21060 -0.3
BPHYT_RS21560 -0.3
BPHYT_RS21610 +0.3
BPHYT_RS21730 +0.1
BPHYT_RS22065 -0.2
BPHYT_RS22425 -0.1
BPHYT_RS26535 -1.2
BPHYT_RS27000 -0.1
BPHYT_RS28370 -0.6
BPHYT_RS28685 +0.3
BPHYT_RS28695 -0.0
BPHYT_RS30590 -0.2
BPHYT_RS30680 +0.2
BPHYT_RS35285 -0.2
Aspartate ammonia-lyase (in reverse):
fumarate + ammonium→L-aspartate
(EC 4.3.1.1)
No genes
Aspartate--ammonia ligase:
L-aspartate + ammonium + ATP→L-asparagine + AMP + diphosphate + H+
(EC 6.3.1.1)
No genes
Asparaginase:
L-asparagine + H2O→L-aspartate + ammonium
(EC 3.5.1.1; 3.5.1.38; 3.5.5.4)
BPHYT_RS07040 +0.3
BPHYT_RS08815 -1.7
BPHYT_RS21005 -0.5

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information