MetaCyc Pathway: fatty acid β-oxidation II (plant peroxisome) in Pseudomonas fluorescens SBW25-INTG

Add experiment(s):


Reactions and Genes L-Valine 10 mM (C)
remove
a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate
No genes
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide
(EC 1.3.3.6)
PFLU_RS15585 -0.3
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 4.2.1.17)
PFLU_RS07105 -0.6
PFLU_RS07650 -2.8
PFLU_RS08485 +0.6
PFLU_RS10835 -0.6
PFLU_RS12025 +0.1
PFLU_RS13550 -0.3
PFLU_RS14775 -5.3
PFLU_RS14785 -3.4
PFLU_RS16080 +0.1
PFLU_RS22820 -0.5
PFLU_RS22840 -0.0
PFLU_RS24260 +0.1
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+
(EC 1.1.1.35)
PFLU_RS07650 -2.8
PFLU_RS11090 -0.1
PFLU_RS22840 -0.0
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA
(EC 2.3.1.16)
PFLU_RS03225 -0.5
PFLU_RS06735 -0.0
PFLU_RS07655 -1.7
PFLU_RS10575 +0.4
PFLU_RS14765 -0.1
PFLU_RS16065 +0.4
PFLU_RS17190 +0.2
PFLU_RS21180 +0.3
PFLU_RS22845 +0.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information