MetaCyc Pathway: indole-3-acetate biosynthesis VI (bacteria) in Pseudomonas fluorescens SBW25-INTG

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Reactions and Genes L-Ornithine 10 mM (C)
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Aspartate transaminase:
L-tryptophan + 2-oxoglutarate→(indol-3-yl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27)
PFLU_RS08510 -0.5
PFLU_RS09125 -0.0
PFLU_RS10980 +0.4
PFLU_RS13455 +0.1
PFLU_RS15480 +0.1
PFLU_RS16880 +0.2
PFLU_RS17055 +0.2
PFLU_RS17810 -0.1
PFLU_RS19680 -0.4
PFLU_RS21080 -0.3
PFLU_RS21355 +0.0
PFLU_RS21880 +0.3
PFLU_RS22640 -2.6
PFLU_RS22895 -1.5
PFLU_RS24775 +0.1
PFLU_RS29405 -0.1
PFLU_RS29850 -0.2
Indolepyruvate decarboxylase:
(indol-3-yl)pyruvate + H+→(indol-3-yl)acetaldehyde + CO2 (EC 4.1.1.74)
No genes
Indole-3-acetaldehyde oxidase:
(indol-3-yl)acetaldehyde + dioxygen + H2O→(indol-3-yl)acetate + hydrogen peroxide + H+ (EC 1.2.3.7)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information