MetaCyc Pathway: putrescine biosynthesis I in Pseudomonas fluorescens FW300-N2E2

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Reactions and Genes nitrogen source nitrite 5mM
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Arginine decarboxylase:
L-arginine + H+→agmatine + CO2 (EC 4.1.1.19)
Pf6N2E2_3334 -1.3
Pf6N2E2_3504 -0.6
Agmatinase:
agmatine + H2O→putrescine + urea (EC 3.5.3.11)
Pf6N2E2_2655 +0.0

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information