MetaCyc Pathway: L-fucose degradation I in Phocaeicola vulgatus CL09T03C04
| Reactions and Genes | L-Fucose 20 mM (C) |
|---|---|
| remove | |
| β-L-fucopyranose→α-L-fucopyranose (spontaneous) (EC 5.1.3.29) | |
| No genes | |
| L-fucose isomerase: α-L-fucopyranose→L-fuculose (EC 5.3.1.25) | |
| HMPREF1058 | -6.1 |
| L-fuculokinase: L-fuculose + ATP→L-fuculose 1-phosphate + ADP + H+ (EC 2.7.1.51) | |
| No genes | |
| L-fuculose-phosphate aldolase: L-fuculose 1-phosphate→(S)-lactaldehyde + glycerone phosphate (EC 4.1.2.17) | |
| No genes | |
Links:
- Pathway details at MetaCyc
- Fitness data for 1 genes
- All MetaCyc pathways for Phocaeicola vulgatus CL09T03C04
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information