MetaCyc Pathway: xyloglucan degradation II (exoglucanase) in Phocaeicola vulgatus CL09T03C04

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Reactions and Genes Beta-Lactose 20 mM (C)
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Xyloglucan-specific endo-beta-1,4-glucanase:
a xyloglucan + n H2O→n XLXG xyloglucan oligosaccharide + n XLFG xyloglucan oligosaccharide + n XXFG xyloglucan oligosaccharide (EC 3.2.1.151)
No genes
Beta-galactosidase:
XLXG xyloglucan oligosaccharide + H2O→XXXG xyloglucan oligosaccharide + D-galactopyranose (EC 3.2.1.23)
HMPREF1058_RS00090 -0.0
HMPREF1058_RS00095 -0.0
HMPREF1058_RS00100 -0.0
HMPREF1058_RS00870 N.D.
HMPREF1058_RS00930 N.D.
HMPREF1058_RS02365 +0.2
HMPREF1058_RS02830 +0.0
HMPREF1058_RS02840 +0.2
HMPREF1058_RS06130 -0.1
HMPREF1058_RS07375 -0.8
HMPREF1058_RS08390 +0.1
HMPREF1058_RS08560 -0.1
HMPREF1058_RS08565 -0.0
HMPREF1058_RS08930 -1.5
HMPREF1058_RS10505 -0.3
HMPREF1058_RS12235 -0.1
HMPREF1058_RS13380 +0.0
HMPREF1058_RS13445 -0.0
HMPREF1058_RS13465 +0.0
HMPREF1058_RS13560 -0.1
HMPREF1058_RS15160 +0.4
HMPREF1058_RS17465 +0.1
HMPREF1058_RS17495 +0.3
HMPREF1058_RS17500 +0.1
HMPREF1058_RS18290 +0.1
Alpha-L-fucosidase:
XXFG xyloglucan oligosaccharide + H2O→XXLG xyloglucan oligosaccharide + L-fucopyranose (EC 3.2.1.51)
HMPREF1058_RS00285 +0.2
HMPREF1058_RS06995 +0.1
HMPREF1058_RS08070 +0.1
HMPREF1058_RS08560 -0.1
HMPREF1058_RS10750 +0.1
HMPREF1058_RS11680 -0.0
HMPREF1058_RS13265 -0.1
Alpha-L-fucosidase:
XLFG xyloglucan oligosaccharide + H2O→XLLG xyloglucan oligosaccharide + L-fucopyranose (EC 3.2.1.51)
HMPREF1058_RS00285 +0.2
HMPREF1058_RS06995 +0.1
HMPREF1058_RS08070 +0.1
HMPREF1058_RS08560 -0.1
HMPREF1058_RS10750 +0.1
HMPREF1058_RS11680 -0.0
HMPREF1058_RS13265 -0.1
Beta-galactosidase:
XXLG xyloglucan oligosaccharide + H2O→XXXG xyloglucan oligosaccharide + D-galactopyranose (EC 3.2.1.23)
HMPREF1058_RS00090 -0.0
HMPREF1058_RS00095 -0.0
HMPREF1058_RS00100 -0.0
HMPREF1058_RS00870 N.D.
HMPREF1058_RS00930 N.D.
HMPREF1058_RS02365 +0.2
HMPREF1058_RS02830 +0.0
HMPREF1058_RS02840 +0.2
HMPREF1058_RS06130 -0.1
HMPREF1058_RS07375 -0.8
HMPREF1058_RS08390 +0.1
HMPREF1058_RS08560 -0.1
HMPREF1058_RS08565 -0.0
HMPREF1058_RS08930 -1.5
HMPREF1058_RS10505 -0.3
HMPREF1058_RS12235 -0.1
HMPREF1058_RS13380 +0.0
HMPREF1058_RS13445 -0.0
HMPREF1058_RS13465 +0.0
HMPREF1058_RS13560 -0.1
HMPREF1058_RS15160 +0.4
HMPREF1058_RS17465 +0.1
HMPREF1058_RS17495 +0.3
HMPREF1058_RS17500 +0.1
HMPREF1058_RS18290 +0.1
Beta-galactosidase:
XLLG xyloglucan oligosaccharide + 2 H2O→XXXG xyloglucan oligosaccharide + 2 D-galactopyranose (EC 3.2.1.23)
HMPREF1058_RS00090 -0.0
HMPREF1058_RS00095 -0.0
HMPREF1058_RS00100 -0.0
HMPREF1058_RS00870 N.D.
HMPREF1058_RS00930 N.D.
HMPREF1058_RS02365 +0.2
HMPREF1058_RS02830 +0.0
HMPREF1058_RS02840 +0.2
HMPREF1058_RS06130 -0.1
HMPREF1058_RS07375 -0.8
HMPREF1058_RS08390 +0.1
HMPREF1058_RS08560 -0.1
HMPREF1058_RS08565 -0.0
HMPREF1058_RS08930 -1.5
HMPREF1058_RS10505 -0.3
HMPREF1058_RS12235 -0.1
HMPREF1058_RS13380 +0.0
HMPREF1058_RS13445 -0.0
HMPREF1058_RS13465 +0.0
HMPREF1058_RS13560 -0.1
HMPREF1058_RS15160 +0.4
HMPREF1058_RS17465 +0.1
HMPREF1058_RS17495 +0.3
HMPREF1058_RS17500 +0.1
HMPREF1058_RS18290 +0.1
Oligoxyloglucan beta-glycosidase:
XXXG xyloglucan oligosaccharide + 3 H2O→3 isoprimeverose + D-glucopyranose (EC 3.2.1.120)
No genes
isoprimeverose + H2O→α-D-xylopyranose + D-glucopyranose (EC 3.2.1.177)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information